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Paper Explained #3: When AI Finally Learned to See and Think: The Multimodal Reasoning Breakthrough That Changed Everything

10 min readSep 5, 2025

Paper: “Multimodal Chain-of-Thought Reasoning in Language Models” Full Paper

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The year was 2023, and AI had a dirty little secret that was driving researchers crazy. While GPT-4 was impressing the world with human-like conversations and complex reasoning, there was one fundamental thing it couldn’t do: look at a picture of two simple magnets and figure out whether they would attract or repel each other.

This wasn’t just embarrassing, it was a massive problem. We had created artificial intelligence that could write poetry, solve calculus, and debate philosophy, but couldn’t handle basic visual reasoning that any 8-year-old could manage in seconds.

The issue ran deeper than anyone realized. When researchers at NYU and Stanford investigated, they discovered something shocking: smaller AI models weren’t just bad at visual reasoning, they were actively hallucinating. They would confidently describe things that weren’t in images, make up scientific explanations, and arrive at completely wrong answers while sounding perfectly logical.

This is the story of how a team of researchers solved one of AI’s most fundamental problems and created a breakthrough that would reshape how machines understand our visual world.

The Problem: When Smart AI Goes Blind

The Magnet Disaster

Let me show you exactly what was going wrong. Researchers presented AI models with this seemingly simple question:

Image: Two magnets positioned with their poles clearly visible Question: “Will these magnets attract or repel each other?” Context: Basic physics — opposite poles attract, same poles repel

Here’s what a traditional language model produced:

Model’s Answer: “The south pole of one magnet is closest to the south pole of the other magnet. Poles that are the same repel. So, these magnets will repel each other.”

Reality: The image actually showed a north pole next to a south pole — they would attract.

The model had essentially made up what it saw, created a confident explanation, and arrived at the wrong answer. This wasn’t a rare glitch, it was happening consistently.

The Scale of the Problem

This visual reasoning failure wasn’t limited to magnets. AI models were struggling with:

Science Diagrams: Misreading laboratory setups, chemical structures, biological processes
Mathematical Graphs: Incorrectly interpreting data visualizations and geometric figures
Educational Content: Failing at textbook problems that required understanding images
Real-world Applications: Unable to reason about photographs in practical contexts

The implications were staggering. Billions of dollars had been invested in AI systems that could excel at text-based tasks but fell apart the moment visual understanding was required.

Why Traditional Approaches Failed

The standard solution seemed obvious: convert images to text descriptions, then let the language model reason with text. This approach, used by most systems, worked like this:

  1. Image Captioning: An AI model looks at the image and writes a description
  2. Text Reasoning: The language model uses this description to answer questions
  3. Final Answer: Combine the reasoning with the original question

The problem? This pipeline was fundamentally broken:

Information Loss: Converting rich visual information into limited text descriptions stripped away crucial details Cascade Errors: Mistakes in captioning propagated through the entire reasoning process Disconnect: The reasoning model never actually “saw” the image, only worked with secondhand descriptions

It was like describing a painting to someone over the phone and expecting them to create an art critique.

The Breakthrough: Two-Stage Multimodal Reasoning

The Core Insight

The research team at NYU and Stanford made a critical observation: the problem wasn’t that smaller models couldn’t reason, it was that they were trying to do too many things at once. When forced to generate reasoning steps and final answers simultaneously, models would hallucinate visual details to fill gaps in their understanding.

Their solution was elegantly simple: split the process into two distinct stages.

Stage 1: Rationale Generation Feed the model both image and text Ask it to generate step-by-step reasoning Focus purely on understanding what’s happening

Stage 2: Answer Inference Take the generated reasoning + original question + image Use this enhanced context to produce the final answer Leverage the better understanding from Stage 1

Why This Works: The Psychology of Machine Learning

Think of it like teaching a student to solve word problems. Instead of demanding immediate answers, you first ask them to explain what they see and understand about the problem. This forces them to engage with the visual information properly before jumping to conclusions.

The two-stage approach works because:

  1. Focused Attention: Each stage has a single, clear objective
  2. Error Correction: Stage 2 can catch and fix mistakes from Stage 1
  3. Better Integration: The model learns to combine visual and textual information more effectively

The Technical Architecture

The researchers used a T5 (Text-to-Text Transfer Transformer) model as their foundation, but enhanced it with sophisticated multimodal capabilities:

Vision Processing: ViT (Vision Transformer): Converts images into patch-level features

Attention Mechanism: Correlates text tokens with image patches

Gated Fusion: Intelligently combines language and vision representations

Two-Stage Training:
Stage 1 Model: Trained to generate high-quality reasoning chains
Stage 2 Model: Trained to make accurate predictions using enhanced context
Independent Optimization: Each stage optimized for its specific task

The Results: Small Models, Big Victories

Performance Breakthrough

The results were nothing short of revolutionary:

ScienceQA Benchmark: Multimodal-CoT (738M parameters): 90.45% accuracy GPT-4 (175B+ parameters): 83.99% accuracy
Previous best small model: 75.17% accuracy

A model with less than 1 billion parameters was outperforming GPT-4, which likely has over 100 times more parameters.

A-OKVQA Benchmark: Multimodal-CoT: 50.57% accuracy Language-only baseline: 47.86% accuracy Significant improvement in knowledge-based visual reasoning

The Hallucination Fix

Remember the magnet problem? Here’s how Multimodal-CoT solved it:

Before (Baseline Model): “The south pole of one magnet is closest to the south pole of the other magnet…” Completely wrong visual interpretation

After (With Vision Features): “The north pole of one magnet is closest to the south pole of the other magnet. Poles that are different attract…” Accurate visual understanding leading to correct answer

The researchers found that 60.7% of hallucination mistakes were corrected when vision features were properly incorporated.

Efficiency Gains

Beyond accuracy, Multimodal-CoT delivered practical benefits:

Faster Convergence: Models reached optimal performance in fewer training epochs Resource Efficiency: Achieved better results with significantly smaller models Deployment Ready: Could run on consumer-grade hardware rather than requiring massive data centers

Real-World Impact: Where This Matters

Educational Technology

Multimodal-CoT enables AI tutoring systems that can: Understand student drawings and diagrams Provide visual explanations for complex concepts Grade assignments that include both text and images Adapt teaching methods based on visual learning styles

Example Application: A student uploads a photo of their physics homework showing force diagrams. The AI can analyze the drawing, identify errors in vector representations, and provide targeted feedback.

Scientific Research

Research applications include: Automated analysis of experimental setups from photographs Understanding of scientific figures and charts in papers Visual data extraction from laboratory instruments Cross-modal reasoning in research publications

Medical Diagnostics

Healthcare implementations: Reasoning about medical images in context of patient history Combining visual symptoms with textual descriptions Educational tools for medical students Decision support systems that consider multiple information types

Industrial Applications

Manufacturing and quality control: Visual inspection combined with specification documents Process monitoring using camera feeds and sensor data Training systems for complex assembly procedures Automated documentation of visual procedures

Technical Deep Dive: How the Magic Happens

The Vision-Language Fusion

The key innovation lies in how Multimodal-CoT combines visual and textual information:

Traditional Approach:

Image → Caption → Text Reasoning → Answer

Multimodal-CoT Approach:

Image + Text → Integrated Understanding → Reasoning → Answer

Attention Mechanisms

The model uses sophisticated attention to understand relationships:

  1. Cross-Modal Attention: Text tokens attend to relevant image patches
  2. Spatial Reasoning: Understanding positional relationships in images
  3. Temporal Reasoning: Processing sequences of visual information

Training Strategy

Stage 1 Training:
Input: Question + Context + Image
Output: Detailed reasoning steps Objective: Generate accurate, detailed rationales

Stage 2 Training:
Input: Question + Context + Image + Stage 1
Rationale Output: Final answer
Objective: Make accurate predictions using enhanced context

Zero-Shot Generalization

One of the most impressive aspects is how well the model generalizes to new types of problems without additional training. The reasoning framework transfers across: Different scientific domains Various image types and quality levels Novel question formats Cross-cultural visual contexts

Evolution and Improvements: What Came Next

The original Multimodal-CoT paper sparked a revolution in multimodal AI research. Here are the major improvements and extensions that followed:

1. Interleaved-Modal Chain-of-Thought (ICoT) — 2024

Innovation: Instead of just generating text-based reasoning, ICoT creates reasoning chains that include both visual and textual elements.

Key Advancement: Attention-driven Selection (ADS) that intelligently selects relevant image regions during reasoning.

Performance: Up to 14% improvement over traditional multimodal CoT methods.

2. Multimodal Chain of Continuous Thought (MCOUT) — 2024

Breakthrough: Moved reasoning from discrete text tokens to continuous latent space, enabling parallel reasoning paths.

Results: MMMU benchmark: 8.23% accuracy improvement ScienceQA: 4.79% improvement
BLEU scores: 8.27% better across tasks

Paper: Available on ArXiv

3. Semantic Enhancement via Soft Negative Sampling — 2024

Problem Solved: High-quality but semantically incorrect rationales that looked good but led to wrong answers.

Solution: Soft negative sampling techniques to improve semantic understanding.

Impact: Better training on hard negative examples that look correct but are logically flawed.

4. Comprehensive Survey and Taxonomy — 2025

Major Review: Comprehensive survey paper covering the entire field of multimodal chain-of-thought reasoning.

New Applications Covered: Robotics and embodied AI Healthcare and medical imaging Autonomous driving systems 3D spatial reasoning Video understanding

5. Industrial Adoption

Google Gemini: Native multimodal reasoning capabilities built on these principles

OpenAI GPT-4V: Enhanced visual reasoning using similar architectures

Claude 3.5: Advanced image understanding with step-by-step reasoning

Current Challenges and Limitations

The Commonsense Problem

Despite remarkable progress, current systems still struggle with:

Spatial Reasoning: Complex 3D understanding and perspective reasoning

Common Sense Knowledge: Things humans know intuitively but aren’t explicitly taught

Cultural Context: Visual interpretations that vary across cultures

Temporal Understanding: Reasoning about sequences of images or video content

Computational Requirements

Resource Intensity: Even “small” models require significant computational resources

Latency Concerns: Two-stage processing adds delay compared to single-stage systems

Scaling Challenges: Performance with thousands of participants or complex visual scenes

Integration Complexity

Legacy System Compatibility: Difficult to integrate with existing AI pipelines

Data Requirements: Need for high-quality paired visual-textual training data

Evaluation Metrics: Standardized benchmarks still evolving

Future Directions: Where We’re Heading

AI-Powered Visual Understanding

Next-Generation Models: Integration with advanced vision models and large language models

Real-Time Processing: Optimizations for live video and streaming applications

Edge Computing: Deployment on mobile devices and embedded systems

Cross-Modal Learning

Audio-Visual-Text: Extending to three-way reasoning across all major modalities

Temporal Reasoning: Better understanding of time-based visual information

3D Understanding: Native support for three-dimensional visual reasoning

Practical Applications

Educational Revolution: AI tutors that understand student work visually

Scientific Discovery: Automated analysis of research imagery and data

Creative Industries: AI that understands visual aesthetics and artistic concepts

Accessibility: Better support for visually impaired users through advanced scene understanding

The Broader Impact: Why This Matters

Democratizing Visual AI

Before Multimodal-CoT, advanced visual reasoning required massive computational resources and proprietary models. This research showed that sophisticated multimodal understanding could be achieved with smaller, more accessible models.

Economic Impact: Reduced barriers to entry for AI applications

Innovation Acceleration: More researchers and companies can build visual AI

Global Access: Developing countries can deploy advanced AI without massive infrastructure

Educational Transformation

Visual reasoning AI is transforming education by: Providing personalized visual explanations Understanding student drawings and diagrams Creating adaptive learning experiences Supporting diverse learning styles

Scientific Advancement

Research across disciplines benefits from AI that can: Analyze experimental imagery automatically Understand complex scientific diagrams Extract data from visual sources Accelerate discovery through automated analysis

Critical Analysis: What’s Still Missing

Limited Context Understanding

Current systems excel at isolated visual reasoning but struggle with:

Long-form Visual Narratives: Understanding sequences of related images

Complex Spatial Relationships: 3D reasoning and perspective understanding

Dynamic Visual Content: Real-time analysis of changing visual information

Evaluation Gaps

Benchmark Limitations: Most evaluations use controlled, academic datasets rather than real-world messy visual data

Cultural Bias: Training and evaluation datasets may not represent global visual diversity

Edge Case Performance: Limited testing on unusual or out-of-distribution visual content

Scalability Concerns

Training Data Requirements: Need for massive paired visual-textual datasets

Computational Scaling: Performance characteristics with very large numbers of users

Real-World Robustness: Behavior under adversarial conditions or corrupted inputs

Resources for Further Exploration

Essential Papers

Original Paper: Multimodal Chain-of-Thought Reasoning in Language Models

Comprehensive Survey: Multimodal Chain-of-Thought Reasoning: A Comprehensive Survey

Latest Developments: Awesome-MCoT Repository

Implementation Resources

Code Repository: Official Implementation

Benchmarks: ScienceQA and A-OKVQA datasets for evaluation

Developer Tools: Hugging Face models and preprocessing utilities

Follow-Up Reading

Interleaved-Modal CoT: Advanced visual-textual reasoning

Continuous Thought: Latent space reasoning approaches

Semantic Enhancement: Improving reasoning quality

Conclusion: The Visual Reasoning Revolution

Multimodal Chain-of-Thought reasoning represents more than just a technical improvement, it’s a fundamental shift in how we think about AI capabilities. For the first time, we have systems that can genuinely understand and reason about visual information in ways that approach human-level performance.

The Technical Achievement: 90.45% accuracy with models under 1 billion parameters 60% reduction in visual hallucinations Outperforming models 100x larger Practical deployment on accessible hardware

The Conceptual Breakthrough: The insight that reasoning quality improves when you separate understanding from decision-making has applications far beyond visual AI. This principle is now being applied across domains from robotics to medical diagnosis.

The Broader Impact: By making advanced visual reasoning accessible through smaller models, this research democratized AI capabilities that were previously limited to tech giants with massive resources.

Looking ahead, the techniques pioneered in Multimodal-CoT continue evolving. Recent developments in continuous reasoning, interleaved modalities, and real-world applications suggest we’re still in the early stages of a transformation that will make AI genuinely useful for visual tasks that matter in daily life.

The next time someone shows you an AI system that can look at a photo and reason about it intelligently, remember that this capability, which seems so natural to humans, required a fundamental rethinking of how machines process and understand our visual world.

What started as solving a simple magnet problem became the foundation for AI that can finally see and think at the same time.

This paper was developed by researchers at New York University and Stanford University. The complete technical details and experimental results are available in the original research publication linked above.

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Shikha Pandey
Shikha Pandey

Written by Shikha Pandey

Software Engineer - Tech Enthusiast - Startup Enthusiast. Reach me out at https://shikhapandey.me/:)

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